Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm14193-201ENSMUST00000105067 153 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm9166-201ENSMUST00000120293 561 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm14247-201ENSMUST00000120950 237 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm12164-201ENSMUST00000121695 551 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm14760-201ENSMUST00000121831 999 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm12407-201ENSMUST00000180219 324 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm26989-201ENSMUST00000182608 749 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm9645-201ENSMUST00000197131 792 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm43186-201ENSMUST00000198130 824 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.12□□□□□ -0.63
Cacna1aP97445 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm11663-201ENSMUST00000117888 290 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm27910-201ENSMUST00000185004 107 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm26013-201ENSMUST00000104404 119 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm11956-201ENSMUST00000119525 512 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Gm12337-201ENSMUST00000119634 400 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.11□□□□□ -0.63
Cacna1aP97445 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.11□□□□□ -0.63
Cacna1aP97445 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cacna1aP97445 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm24891-201ENSMUST00000104391 136 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms