Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.19□□□□□ -0.3
Lig3P97386 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.19□□□□□ -0.3
Lig3P97386 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lig3P97386 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.19□□□□□ -0.3
Lig3P97386 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.19□□□□□ -0.3
Lig3P97386 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lig3P97386 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.19□□□□□ -0.3
Lig3P97386 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.19□□□□□ -0.3
Lig3P97386 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.19□□□□□ -0.3
Lig3P97386 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.18□□□□□ -0.3
Lig3P97386 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Lig3P97386 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.18□□□□□ -0.3
Lig3P97386 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.18□□□□□ -0.3
Lig3P97386 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.18□□□□□ -0.3
Lig3P97386 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.18□□□□□ -0.3
Lig3P97386 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.18□□□□□ -0.3
Lig3P97386 Gm8285-201ENSMUST00000208293 759 ntBASIC13.18□□□□□ -0.3
Lig3P97386 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.18□□□□□ -0.3
Lig3P97386 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Gm10179-201ENSMUST00000086233 688 ntBASIC13.18□□□□□ -0.3
Lig3P97386 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.18□□□□□ -0.3
Lig3P97386 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lig3P97386 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lig3P97386 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Lig3P97386 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Gm16397-201ENSMUST00000122201 494 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.17□□□□□ -0.3
Lig3P97386 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.17□□□□□ -0.3
Lig3P97386 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.17□□□□□ -0.3
Lig3P97386 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.17□□□□□ -0.3
Lig3P97386 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.17□□□□□ -0.3
Lig3P97386 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.17□□□□□ -0.3
Lig3P97386 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.17□□□□□ -0.3
Lig3P97386 Gm10752-201ENSMUST00000218348 729 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Gzmn-202ENSMUST00000225535 989 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lig3P97386 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms