Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm5451-201ENSMUST00000080545 579 ntBASIC15.02■□□□□ -0
Nkx2-3P97334 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.02□□□□□ -0.01
Nkx2-3P97334 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.02□□□□□ -0.01
Nkx2-3P97334 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-3P97334 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Gm11244-201ENSMUST00000121243 237 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 Gm23218-201ENSMUST00000158124 276 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Mir8093-201ENSMUST00000185043 137 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.01□□□□□ -0.01
Nkx2-3P97334 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-3P97334 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-3P97334 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Nkx2-3P97334 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Nkx2-3P97334 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15□□□□□ -0.01
Nkx2-3P97334 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Gm6407-201ENSMUST00000176468 549 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 Gm17877-201ENSMUST00000192578 814 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 Gm37319-201ENSMUST00000193500 636 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 Gm37826-201ENSMUST00000195329 322 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 Gm42518-201ENSMUST00000196277 938 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 AC164437.3-201ENSMUST00000228323 347 ntBASIC15□□□□□ -0.01
Nkx2-3P97334 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nkx2-3P97334 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-3P97334 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-3P97334 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-3P97334 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-3P97334 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Nkx2-3P97334 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-3P97334 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms