Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trim43bP86448 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trim43bP86448 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim43bP86448 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 Gm27320-201ENSMUST00000184892 109 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 Gm43758-201ENSMUST00000199500 367 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Gm24136-201ENSMUST00000083374 165 ntBASIC12.38□□□□□ -0.43
Trim43bP86448 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim43bP86448 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trim43bP86448 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trim43bP86448 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim43bP86448 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43bP86448 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim43bP86448 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim43bP86448 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm13350-201ENSMUST00000120519 479 ntBASIC12.37□□□□□ -0.43
Trim43bP86448 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim43bP86448 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm4034-201ENSMUST00000187674 480 ntBASIC12.37□□□□□ -0.43
Trim43bP86448 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.37□□□□□ -0.43
Trim43bP86448 Cts7-204ENSMUST00000225321 1257 ntBASIC12.37□□□□□ -0.43
Trim43bP86448 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim43bP86448 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim43bP86448 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43bP86448 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43bP86448 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.37□□□□□ -0.43
Trim43bP86448 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim43bP86448 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Trim43bP86448 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms