Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.07□□□□□ -0.8
SgcaP82350 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcaP82350 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
SgcaP82350 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
SgcaP82350 Gm13123-201ENSMUST00000122173 492 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Gm20949-201ENSMUST00000206478 952 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.07□□□□□ -0.8
SgcaP82350 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.07□□□□□ -0.8
SgcaP82350 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcaP82350 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcaP82350 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SgcaP82350 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcaP82350 Gm16479-201ENSMUST00000121706 932 ntBASIC10.06□□□□□ -0.8
SgcaP82350 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Gm16215-201ENSMUST00000161990 637 ntBASIC10.06□□□□□ -0.8
SgcaP82350 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcaP82350 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcaP82350 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Gm9022-201ENSMUST00000182482 992 ntBASIC10.06□□□□□ -0.8
SgcaP82350 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.06□□□□□ -0.8
SgcaP82350 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.06□□□□□ -0.8
SgcaP82350 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcaP82350 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.06□□□□□ -0.8
SgcaP82350 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.06□□□□□ -0.8
SgcaP82350 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SgcaP82350 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SgcaP82350 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SgcaP82350 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.06□□□□□ -0.8
SgcaP82350 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcaP82350 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms