Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Gm26226-201ENSMUST00000082509 116 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.77□□□□□ -0.69
SgcbP82349 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
SgcbP82349 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
SgcbP82349 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.76□□□□□ -0.69
SgcbP82349 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Gm7722-201ENSMUST00000120646 741 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.76□□□□□ -0.69
SgcbP82349 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Gm8913-201ENSMUST00000209491 641 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.76□□□□□ -0.69
SgcbP82349 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.76□□□□□ -0.69
SgcbP82349 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SgcbP82349 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
SgcbP82349 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.76□□□□□ -0.69
SgcbP82349 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
SgcbP82349 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
SgcbP82349 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
SgcbP82349 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcbP82349 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Rubie-203ENSMUST00000227803 2430 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SgcbP82349 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.75□□□□□ -0.69
SgcbP82349 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.75□□□□□ -0.69
SgcbP82349 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.75□□□□□ -0.69
SgcbP82349 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
SgcbP82349 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Gm2260-201ENSMUST00000184965 657 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Gm5363-201ENSMUST00000211927 938 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms