Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.85□□□□□ -0.51
Shox2P70390 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.84□□□□□ -0.51
Shox2P70390 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Shox2P70390 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Gm15321-201ENSMUST00000121290 288 ntBASIC11.84□□□□□ -0.51
Shox2P70390 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Shox2P70390 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.84□□□□□ -0.51
Shox2P70390 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.84□□□□□ -0.51
Shox2P70390 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Shox2P70390 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.84□□□□□ -0.51
Shox2P70390 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.84□□□□□ -0.51
Shox2P70390 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shox2P70390 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shox2P70390 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.83□□□□□ -0.51
Shox2P70390 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shox2P70390 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shox2P70390 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Shox2P70390 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Shox2P70390 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Shox2P70390 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Shox2P70390 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Shox2P70390 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Shox2P70390 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.83□□□□□ -0.52
Shox2P70390 Gm11700-201ENSMUST00000119409 403 ntBASIC11.83□□□□□ -0.52
Shox2P70390 Gm13492-201ENSMUST00000119772 665 ntBASIC11.83□□□□□ -0.52
Shox2P70390 Gm14247-201ENSMUST00000120950 237 ntBASIC11.83□□□□□ -0.52
Shox2P70390 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.83□□□□□ -0.52
Shox2P70390 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.83□□□□□ -0.52
Shox2P70390 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.83□□□□□ -0.52
Shox2P70390 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.83□□□□□ -0.52
Shox2P70390 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.83□□□□□ -0.52
Shox2P70390 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.83□□□□□ -0.52
Shox2P70390 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.83□□□□□ -0.52
Shox2P70390 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.83□□□□□ -0.52
Shox2P70390 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.83□□□□□ -0.52
Shox2P70390 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.83□□□□□ -0.52
Shox2P70390 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.83□□□□□ -0.52
Shox2P70390 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Shox2P70390 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shox2P70390 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Shox2P70390 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms