Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm11949-201ENSMUST00000117640 372 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Gm15004-201ENSMUST00000119192 630 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Gm12899-201ENSMUST00000120565 551 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.31□□□□□ -0.44
Ybx1P62960 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm23771-201ENSMUST00000178702 110 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm27910-201ENSMUST00000185004 107 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm37905-201ENSMUST00000195310 341 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Ybx1P62960 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ybx1P62960 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.31□□□□□ -0.44
Ybx1P62960 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ybx1P62960 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ybx1P62960 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ybx1P62960 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Gm13263-201ENSMUST00000121271 838 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Gm11675-201ENSMUST00000121873 832 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Gm37299-201ENSMUST00000193951 826 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ybx1P62960 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ybx1P62960 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.3□□□□□ -0.44
Ybx1P62960 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ybx1P62960 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ybx1P62960 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ybx1P62960 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ybx1P62960 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.29□□□□□ -0.44
Ybx1P62960 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ybx1P62960 Gm8731-201ENSMUST00000118088 412 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.29□□□□□ -0.44
Ybx1P62960 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Gm4310-201ENSMUST00000177847 889 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Mir7076-201ENSMUST00000183519 74 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms