Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Gm35048-201ENSMUST00000192105 2802 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC6.86□□□□□ -1.31
Rps28P62858 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC6.86□□□□□ -1.31
Rps28P62858 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC6.86□□□□□ -1.31
Rps28P62858 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Gm18934-201ENSMUST00000216671 1044 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rps28P62858 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rps28P62858 AC090962.1-201ENSMUST00000226066 1799 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Rps28P62858 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rps28P62858 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Gm10040-201ENSMUST00000080726 1662 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rps28P62858 Gm43221-201ENSMUST00000197612 2071 ntBASIC6.86□□□□□ -1.31
Rps28P62858 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rps28P62858 Gm28557-203ENSMUST00000186303 3886 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Rps28P62858 Gm5386-201ENSMUST00000121749 2450 ntBASIC6.86□□□□□ -1.31
Rps28P62858 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rps28P62858 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Stard13-208ENSMUST00000202111 3373 ntTSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gm21038-201ENSMUST00000222205 1383 ntBASIC6.85□□□□□ -1.31
Rps28P62858 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Rps28P62858 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gm7507-201ENSMUST00000183053 1008 ntBASIC6.85□□□□□ -1.31
Rps28P62858 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rps28P62858 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC6.85□□□□□ -1.31
Rps28P62858 Gm6082-201ENSMUST00000215204 454 ntBASIC6.85□□□□□ -1.31
Rps28P62858 AI463170-201ENSMUST00000217839 970 ntBASIC6.85□□□□□ -1.31
Rps28P62858 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC6.85□□□□□ -1.31
Rps28P62858 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rps28P62858 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gm37737-201ENSMUST00000195013 1638 ntBASIC6.85□□□□□ -1.31
Rps28P62858 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.85□□□□□ -1.31
Rps28P62858 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Rps28P62858 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rps28P62858 Gm38275-201ENSMUST00000193293 1532 ntBASIC6.85□□□□□ -1.31
Rps28P62858 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms