Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm20445-201ENSMUST00000061905 565 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm8000-201ENSMUST00000188378 592 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm3P62311 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm3P62311 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm3P62311 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.88□□□□□ -0.67
Lsm3P62311 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.88□□□□□ -0.67
Lsm3P62311 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.88□□□□□ -0.67
Lsm3P62311 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm3P62311 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm3P62311 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Lsm3P62311 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lsm3P62311 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lsm3P62311 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm13223-201ENSMUST00000118609 747 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm22175-201ENSMUST00000175007 78 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Gm22121-201ENSMUST00000175148 54 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Gm27243-201ENSMUST00000183964 521 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.87□□□□□ -0.67
Lsm3P62311 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms