Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Gm15370-201ENSMUST00000117158 253 ntBASIC10.61□□□□□ -0.71
Sec61a1P61620 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.61□□□□□ -0.71
Sec61a1P61620 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Gm12502-201ENSMUST00000120197 444 ntBASIC10.61□□□□□ -0.71
Sec61a1P61620 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.61□□□□□ -0.71
Sec61a1P61620 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.61□□□□□ -0.71
Sec61a1P61620 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Gm43822-201ENSMUST00000200285 476 ntBASIC10.61□□□□□ -0.71
Sec61a1P61620 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.61□□□□□ -0.71
Sec61a1P61620 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.61□□□□□ -0.71
Sec61a1P61620 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Sec61a1P61620 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sec61a1P61620 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm13786-201ENSMUST00000122371 333 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm38266-201ENSMUST00000194931 421 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.6□□□□□ -0.71
Sec61a1P61620 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Gm5781-201ENSMUST00000219792 443 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Cts7-204ENSMUST00000225321 1257 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sec61a1P61620 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.6□□□□□ -0.71
Sec61a1P61620 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sec61a1P61620 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms