Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cks1bP61025 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm13223-201ENSMUST00000118609 747 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC8.61□□□□□ -1.03
Cks1bP61025 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm27838-201ENSMUST00000184829 128 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.61□□□□□ -1.03
Cks1bP61025 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm18164-201ENSMUST00000213769 927 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Gm18166-201ENSMUST00000215557 927 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 AC126408.1-201ENSMUST00000225184 523 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cks1bP61025 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
Cks1bP61025 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm38910-201ENSMUST00000204630 2448 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.61□□□□□ -1.03
Cks1bP61025 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cks1bP61025 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.61□□□□□ -1.03
Cks1bP61025 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Cks1bP61025 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Cks1bP61025 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.6□□□□□ -1.03
Cks1bP61025 Gm27989-201ENSMUST00000184721 107 ntBASIC8.6□□□□□ -1.03
Cks1bP61025 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC8.6□□□□□ -1.03
Cks1bP61025 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Cks1bP61025 Gm43575-201ENSMUST00000196420 516 ntBASIC8.6□□□□□ -1.03
Cks1bP61025 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.6□□□□□ -1.03
Cks1bP61025 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Cks1bP61025 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC8.6□□□□□ -1.03
Cks1bP61025 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms