Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tpm1P58771 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tpm1P58771 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm1P58771 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tpm1P58771 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Tpm1P58771 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.38□□□□□ -0.27
Tpm1P58771 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.38□□□□□ -0.27
Tpm1P58771 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.38□□□□□ -0.27
Tpm1P58771 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Tpm1P58771 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Gm27486-201ENSMUST00000184923 80 ntBASIC13.38□□□□□ -0.27
Tpm1P58771 Gm45384-201ENSMUST00000210451 277 ntBASIC13.38□□□□□ -0.27
Tpm1P58771 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.38□□□□□ -0.27
Tpm1P58771 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Tpm1P58771 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm1P58771 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm1P58771 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm1P58771 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.37□□□□□ -0.27
Tpm1P58771 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tpm1P58771 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tpm1P58771 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tpm1P58771 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.37□□□□□ -0.27
Tpm1P58771 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm23984-201ENSMUST00000157139 203 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.37□□□□□ -0.27
Tpm1P58771 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.37□□□□□ -0.27
Tpm1P58771 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm45925-201ENSMUST00000218882 744 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 Gm45930-201ENSMUST00000221330 292 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm1P58771 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.37□□□□□ -0.27
Tpm1P58771 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tpm1P58771 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Tpm1P58771 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Tpm1P58771 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Gm12036-201ENSMUST00000120008 530 ntBASIC13.36□□□□□ -0.27
Tpm1P58771 Gm24644-201ENSMUST00000157114 139 ntBASIC13.36□□□□□ -0.27
Tpm1P58771 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.36□□□□□ -0.27
Tpm1P58771 Gm27892-201ENSMUST00000185017 106 ntBASIC13.36□□□□□ -0.27
Tpm1P58771 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms