Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.22□□□□□ -0.45
Ddx6P54823 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.22□□□□□ -0.45
Ddx6P54823 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.22□□□□□ -0.45
Ddx6P54823 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.22□□□□□ -0.45
Ddx6P54823 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ddx6P54823 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.22□□□□□ -0.45
Ddx6P54823 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx6P54823 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.22□□□□□ -0.45
Ddx6P54823 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Ddx6P54823 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.21□□□□□ -0.45
Ddx6P54823 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.21□□□□□ -0.45
Ddx6P54823 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.21□□□□□ -0.45
Ddx6P54823 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.21□□□□□ -0.45
Ddx6P54823 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.21□□□□□ -0.45
Ddx6P54823 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.21□□□□□ -0.45
Ddx6P54823 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.21□□□□□ -0.45
Ddx6P54823 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Gm44506-201ENSMUST00000206278 965 ntBASIC12.21□□□□□ -0.45
Ddx6P54823 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ddx6P54823 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx6P54823 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx6P54823 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ddx6P54823 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ddx6P54823 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ddx6P54823 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx6P54823 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ddx6P54823 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ddx6P54823 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx6P54823 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx6P54823 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.2□□□□□ -0.46
Ddx6P54823 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ddx6P54823 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.2□□□□□ -0.46
Ddx6P54823 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm21092-201ENSMUST00000178995 955 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm8365-201ENSMUST00000197334 648 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Gm43852-201ENSMUST00000202098 917 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.2□□□□□ -0.46
Ddx6P54823 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.2□□□□□ -0.46
Ddx6P54823 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ddx6P54823 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.2□□□□□ -0.46
Ddx6P54823 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ddx6P54823 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.2□□□□□ -0.46
Ddx6P54823 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx6P54823 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms