Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Fdft1P53798 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Fdft1P53798 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Fdft1P53798 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Fdft1P53798 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 Gm13297-201ENSMUST00000120205 934 ntBASIC12.02□□□□□ -0.49
Fdft1P53798 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.02□□□□□ -0.49
Fdft1P53798 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.02□□□□□ -0.49
Fdft1P53798 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.02□□□□□ -0.49
Fdft1P53798 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Fdft1P53798 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Fdft1P53798 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.02□□□□□ -0.49
Fdft1P53798 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.02□□□□□ -0.49
Fdft1P53798 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Fdft1P53798 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fdft1P53798 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Fdft1P53798 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Fdft1P53798 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Fdft1P53798 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Fdft1P53798 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Gm25214-201ENSMUST00000104573 129 ntBASIC12.01□□□□□ -0.49
Fdft1P53798 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Fdft1P53798 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Fdft1P53798 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.01□□□□□ -0.49
Fdft1P53798 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Fdft1P53798 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Fdft1P53798 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fdft1P53798 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 Gm14832-201ENSMUST00000121289 322 ntBASIC12□□□□□ -0.49
Fdft1P53798 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12□□□□□ -0.49
Fdft1P53798 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12□□□□□ -0.49
Fdft1P53798 Gm26956-201ENSMUST00000182176 986 ntBASIC12□□□□□ -0.49
Fdft1P53798 Gm27501-201ENSMUST00000183599 107 ntBASIC12□□□□□ -0.49
Fdft1P53798 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12□□□□□ -0.49
Fdft1P53798 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms