Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.55□□□□□ -0.56
Sox3P53784 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox3P53784 Gm12015-201ENSMUST00000117065 843 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Gm12380-201ENSMUST00000119012 544 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox3P53784 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Gm10051-201ENSMUST00000145209 414 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.55□□□□□ -0.56
Sox3P53784 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Gm38092-201ENSMUST00000195600 653 ntBASIC11.55□□□□□ -0.56
Sox3P53784 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox3P53784 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm25517-201ENSMUST00000083865 134 ntBASIC11.55□□□□□ -0.56
Sox3P53784 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.55□□□□□ -0.56
Sox3P53784 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox3P53784 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox3P53784 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.54□□□□□ -0.56
Sox3P53784 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.54□□□□□ -0.56
Sox3P53784 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Gm25880-201ENSMUST00000104331 132 ntBASIC11.54□□□□□ -0.56
Sox3P53784 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.54□□□□□ -0.56
Sox3P53784 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.54□□□□□ -0.56
Sox3P53784 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox3P53784 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox3P53784 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox3P53784 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.54□□□□□ -0.56
Sox3P53784 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Sox3P53784 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms