Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.32□□□□□ -0.44
ClgnP52194 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClgnP52194 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.31□□□□□ -0.44
ClgnP52194 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Gm13297-201ENSMUST00000120205 934 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Gm13570-201ENSMUST00000140763 309 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ClgnP52194 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.31□□□□□ -0.44
ClgnP52194 Gm2546-201ENSMUST00000182630 991 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Olfr284-202ENSMUST00000206647 966 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ClgnP52194 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.31□□□□□ -0.44
ClgnP52194 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClgnP52194 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClgnP52194 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ClgnP52194 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Gm9083-201ENSMUST00000120423 819 ntBASIC12.3□□□□□ -0.44
ClgnP52194 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.3□□□□□ -0.44
ClgnP52194 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.3□□□□□ -0.44
ClgnP52194 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.3□□□□□ -0.44
ClgnP52194 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ClgnP52194 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.3□□□□□ -0.44
ClgnP52194 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.3□□□□□ -0.44
ClgnP52194 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClgnP52194 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClgnP52194 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClgnP52194 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClgnP52194 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClgnP52194 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClgnP52194 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.29□□□□□ -0.44
ClgnP52194 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ClgnP52194 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms