Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
SftpdP50404 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.63□□□□□ -0.39
SftpdP50404 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.63□□□□□ -0.39
SftpdP50404 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.63□□□□□ -0.39
SftpdP50404 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.63□□□□□ -0.39
SftpdP50404 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SftpdP50404 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
SftpdP50404 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.63□□□□□ -0.39
SftpdP50404 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Gm22133-201ENSMUST00000102082 109 ntBASIC12.62□□□□□ -0.39
SftpdP50404 Mir877-201ENSMUST00000104738 85 ntBASIC12.62□□□□□ -0.39
SftpdP50404 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SftpdP50404 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Gm27627-201ENSMUST00000183644 150 ntBASIC12.62□□□□□ -0.39
SftpdP50404 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.62□□□□□ -0.39
SftpdP50404 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.62□□□□□ -0.39
SftpdP50404 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.62□□□□□ -0.39
SftpdP50404 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SftpdP50404 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SftpdP50404 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SftpdP50404 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SftpdP50404 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SftpdP50404 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.62□□□□□ -0.39
SftpdP50404 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.62□□□□□ -0.39
SftpdP50404 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpdP50404 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SftpdP50404 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpdP50404 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpdP50404 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.61□□□□□ -0.39
SftpdP50404 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.61□□□□□ -0.39
SftpdP50404 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpdP50404 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SftpdP50404 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.61□□□□□ -0.39
SftpdP50404 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.61□□□□□ -0.39
SftpdP50404 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms