Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
GdnfP48540 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.58□□□□□ -0.72
GdnfP48540 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.58□□□□□ -0.72
GdnfP48540 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
GdnfP48540 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.58□□□□□ -0.72
GdnfP48540 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.58□□□□□ -0.72
GdnfP48540 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.58□□□□□ -0.72
GdnfP48540 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
GdnfP48540 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Gm14127-201ENSMUST00000117906 678 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Gm11591-201ENSMUST00000120063 702 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.57□□□□□ -0.72
GdnfP48540 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.57□□□□□ -0.72
GdnfP48540 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.57□□□□□ -0.72
GdnfP48540 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
GdnfP48540 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.57□□□□□ -0.72
GdnfP48540 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.57□□□□□ -0.72
GdnfP48540 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
GdnfP48540 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.56□□□□□ -0.72
GdnfP48540 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.56□□□□□ -0.72
GdnfP48540 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.56□□□□□ -0.72
GdnfP48540 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.56□□□□□ -0.72
GdnfP48540 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.56□□□□□ -0.72
GdnfP48540 Gm7809-201ENSMUST00000153199 742 ntBASIC10.56□□□□□ -0.72
GdnfP48540 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.56□□□□□ -0.72
GdnfP48540 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.56□□□□□ -0.72
GdnfP48540 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.56□□□□□ -0.72
GdnfP48540 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.56□□□□□ -0.72
GdnfP48540 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms