Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Tnfsf9P41274 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.52□□□□□ -0.57
Tnfsf9P41274 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.52□□□□□ -0.57
Tnfsf9P41274 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfsf9P41274 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf9P41274 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm15515-201ENSMUST00000117827 822 ntBASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm5419-201ENSMUST00000119301 527 ntBASIC11.51□□□□□ -0.57
Tnfsf9P41274 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.51□□□□□ -0.57
Tnfsf9P41274 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.51□□□□□ -0.57
Tnfsf9P41274 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.51□□□□□ -0.57
Tnfsf9P41274 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf9P41274 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm24891-201ENSMUST00000104391 136 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm11660-201ENSMUST00000120955 412 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm23085-201ENSMUST00000157849 293 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm28686-201ENSMUST00000187404 609 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm5369-201ENSMUST00000217499 588 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Gm5705-201ENSMUST00000066241 711 ntBASIC11.5□□□□□ -0.57
Tnfsf9P41274 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf9P41274 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms