Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col2a1P28481 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm15528-201ENSMUST00000117821 864 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Gm15549-201ENSMUST00000121595 622 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm8492-201ENSMUST00000182375 987 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.47□□□□□ -0.25
Col2a1P28481 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm5100-201ENSMUST00000195631 589 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.47□□□□□ -0.25
Col2a1P28481 Lect2-202ENSMUST00000225183 823 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm23680-201ENSMUST00000083162 164 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Col2a1P28481 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.46□□□□□ -0.25
Col2a1P28481 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.46□□□□□ -0.25
Col2a1P28481 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col2a1P28481 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col2a1P28481 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.46□□□□□ -0.25
Col2a1P28481 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.46□□□□□ -0.25
Col2a1P28481 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.46□□□□□ -0.25
Col2a1P28481 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col2a1P28481 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col2a1P28481 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col2a1P28481 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.46□□□□□ -0.25
Col2a1P28481 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col2a1P28481 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Col2a1P28481 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col2a1P28481 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col2a1P28481 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.45□□□□□ -0.26
Col2a1P28481 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col2a1P28481 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.45□□□□□ -0.26
Col2a1P28481 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
Col2a1P28481 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.45□□□□□ -0.26
Col2a1P28481 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Gm15744-201ENSMUST00000161734 213 ntBASIC13.45□□□□□ -0.26
Col2a1P28481 Gm26134-201ENSMUST00000178484 110 ntBASIC13.45□□□□□ -0.26
Col2a1P28481 Gm8531-201ENSMUST00000188319 893 ntBASIC13.45□□□□□ -0.26
Col2a1P28481 Gm8197-202ENSMUST00000193422 934 ntBASIC13.45□□□□□ -0.26
Col2a1P28481 Gm5996-201ENSMUST00000211110 718 ntBASIC13.45□□□□□ -0.26
Col2a1P28481 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.45□□□□□ -0.26
Col2a1P28481 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Col2a1P28481 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms