Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm12857-201ENSMUST00000117678 592 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm10051-201ENSMUST00000145209 414 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm5733-201ENSMUST00000190232 939 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.37□□□□□ -0.43
Nfkb1P25799 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nfkb1P25799 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nfkb1P25799 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm5419-201ENSMUST00000119301 527 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm13408-201ENSMUST00000119822 798 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm15432-201ENSMUST00000121106 195 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm13935-201ENSMUST00000121859 798 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm28686-201ENSMUST00000187404 609 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nfkb1P25799 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.36□□□□□ -0.43
Nfkb1P25799 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms