Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm26956-201ENSMUST00000182176 986 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm27572-201ENSMUST00000183702 255 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm45331-201ENSMUST00000209868 554 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm10608-202ENSMUST00000213924 676 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1aP25118 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm23931-201ENSMUST00000103842 109 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm11793-201ENSMUST00000120433 981 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm29396-201ENSMUST00000185659 716 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm38158-201ENSMUST00000194617 339 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Morn2-202ENSMUST00000227729 656 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm9996-201ENSMUST00000070359 913 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms