Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm12948-201ENSMUST00000119406 682 ntBASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm7150-201ENSMUST00000122032 981 ntBASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hoxd8P23463 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm3551-201ENSMUST00000190750 664 ntBASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm43852-201ENSMUST00000202098 917 ntBASIC12.43□□□□□ -0.42
Hoxd8P23463 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.43□□□□□ -0.42
Hoxd8P23463 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxd8P23463 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxd8P23463 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxd8P23463 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm12419-201ENSMUST00000116649 636 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm12516-201ENSMUST00000120819 385 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxd8P23463 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxd8P23463 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Mir8093-201ENSMUST00000185043 137 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm43610-201ENSMUST00000199117 365 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm42599-201ENSMUST00000201308 469 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxd8P23463 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxd8P23463 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Olfr584-201ENSMUST00000098210 964 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.42□□□□□ -0.42
Hoxd8P23463 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxd8P23463 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxd8P23463 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxd8P23463 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxd8P23463 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxd8P23463 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.41□□□□□ -0.42
Hoxd8P23463 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.41□□□□□ -0.42
Hoxd8P23463 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxd8P23463 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxd8P23463 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hoxd8P23463 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms