Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.15□□□□□ -0.46
VimP20152 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.15□□□□□ -0.46
VimP20152 Chchd1-203ENSMUST00000224633 557 ntBASIC12.15□□□□□ -0.46
VimP20152 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
VimP20152 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
VimP20152 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.15□□□□□ -0.46
VimP20152 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VimP20152 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
VimP20152 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.15□□□□□ -0.47
VimP20152 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VimP20152 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VimP20152 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
VimP20152 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.14□□□□□ -0.47
VimP20152 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
VimP20152 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.14□□□□□ -0.47
VimP20152 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Gm6152-201ENSMUST00000151704 340 ntBASIC12.14□□□□□ -0.47
VimP20152 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.14□□□□□ -0.47
VimP20152 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.14□□□□□ -0.47
VimP20152 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
VimP20152 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
VimP20152 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VimP20152 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.13□□□□□ -0.47
VimP20152 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
VimP20152 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.13□□□□□ -0.47
VimP20152 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
VimP20152 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
VimP20152 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.13□□□□□ -0.47
VimP20152 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.13□□□□□ -0.47
VimP20152 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.13□□□□□ -0.47
VimP20152 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.13□□□□□ -0.47
VimP20152 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
VimP20152 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.13□□□□□ -0.47
VimP20152 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
VimP20152 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VimP20152 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms