Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Mir449b-201ENSMUST00000104833 80 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm5687-201ENSMUST00000118252 640 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm22121-201ENSMUST00000175148 54 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm43002-201ENSMUST00000200310 155 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Sdc1P18828 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm807-202ENSMUST00000224929 408 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Sdc1P18828 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Sdc1P18828 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.8□□□□□ -0.84
Sdc1P18828 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.8□□□□□ -0.84
Sdc1P18828 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sdc1P18828 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sdc1P18828 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.79□□□□□ -0.84
Sdc1P18828 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Gm13689-201ENSMUST00000119360 685 ntBASIC9.79□□□□□ -0.84
Sdc1P18828 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.79□□□□□ -0.84
Sdc1P18828 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.79□□□□□ -0.84
Sdc1P18828 Gm9136-201ENSMUST00000193368 454 ntBASIC9.79□□□□□ -0.84
Sdc1P18828 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.79□□□□□ -0.84
Sdc1P18828 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sdc1P18828 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sdc1P18828 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Sdc1P18828 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.79□□□□□ -0.84
Sdc1P18828 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.79□□□□□ -0.84
Sdc1P18828 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Sdc1P18828 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sdc1P18828 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sdc1P18828 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sdc1P18828 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sdc1P18828 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sdc1P18828 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms