Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fv4P11370 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fv4P11370 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Fv4P11370 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Fv4P11370 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.6□□□□□ -0.55
Fv4P11370 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fv4P11370 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.59□□□□□ -0.55
Fv4P11370 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.59□□□□□ -0.55
Fv4P11370 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.59□□□□□ -0.55
Fv4P11370 Gm13297-201ENSMUST00000120205 934 ntBASIC11.59□□□□□ -0.55
Fv4P11370 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Gm14441-201ENSMUST00000121960 540 ntBASIC11.59□□□□□ -0.55
Fv4P11370 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Fv4P11370 Gm18054-201ENSMUST00000207539 555 ntBASIC11.59□□□□□ -0.55
Fv4P11370 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.59□□□□□ -0.55
Fv4P11370 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Fv4P11370 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.59□□□□□ -0.55
Fv4P11370 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Fv4P11370 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Fv4P11370 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fv4P11370 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fv4P11370 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fv4P11370 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.58□□□□□ -0.55
Fv4P11370 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Fv4P11370 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fv4P11370 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fv4P11370 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm14644-201ENSMUST00000116671 647 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Gm26956-201ENSMUST00000182176 986 ntBASIC11.58□□□□□ -0.56
Fv4P11370 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Olfr284-202ENSMUST00000206647 966 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Gm10608-202ENSMUST00000213924 676 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm8712-201ENSMUST00000221090 701 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm9823-201ENSMUST00000051212 327 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.58□□□□□ -0.56
Fv4P11370 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.58□□□□□ -0.56
Fv4P11370 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Fv4P11370 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fv4P11370 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Fv4P11370 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.57□□□□□ -0.56
Fv4P11370 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fv4P11370 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.57□□□□□ -0.56
Fv4P11370 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms