Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxc6P10629 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm12419-201ENSMUST00000116649 636 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm14219-201ENSMUST00000120414 288 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.3□□□□□ -0.28
Hoxc6P10629 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm3619-201ENSMUST00000219947 775 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm5451-201ENSMUST00000080545 579 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm23680-201ENSMUST00000083162 164 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.3□□□□□ -0.28
Hoxc6P10629 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc6P10629 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxc6P10629 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm13600-201ENSMUST00000117949 744 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm7150-201ENSMUST00000122032 981 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm9136-201ENSMUST00000193368 454 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm8342-201ENSMUST00000209839 757 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hoxc6P10629 Olfr584-201ENSMUST00000098210 964 ntBASIC13.29□□□□□ -0.28
Hoxc6P10629 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc6P10629 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxc6P10629 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm24398-201ENSMUST00000157870 109 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm22877-201ENSMUST00000175451 105 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm38151-201ENSMUST00000195085 289 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm6450-201ENSMUST00000200896 574 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm17931-201ENSMUST00000208132 634 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms