Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm4294-201ENSMUST00000105169 614 ntBASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm15374-201ENSMUST00000119313 844 ntBASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.71□□□□□ -0.37
Hoxc8P09025 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.71□□□□□ -0.37
Hoxc8P09025 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc8P09025 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc8P09025 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hoxc8P09025 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Hoxc8P09025 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Hoxc8P09025 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.71□□□□□ -0.38
Hoxc8P09025 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hoxc8P09025 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.71□□□□□ -0.38
Hoxc8P09025 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc8P09025 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.7□□□□□ -0.38
Hoxc8P09025 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.7□□□□□ -0.38
Hoxc8P09025 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc8P09025 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxc8P09025 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm25063-201ENSMUST00000104666 94 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm14892-201ENSMUST00000117636 267 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm12990-201ENSMUST00000120372 468 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxc8P09025 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms