Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.23□□□□□ -0.61
Sod1P08228 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.23□□□□□ -0.61
Sod1P08228 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.23□□□□□ -0.61
Sod1P08228 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.23□□□□□ -0.61
Sod1P08228 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.22□□□□□ -0.61
Sod1P08228 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gm25766-201ENSMUST00000104101 131 ntBASIC11.22□□□□□ -0.61
Sod1P08228 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.22□□□□□ -0.61
Sod1P08228 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.22□□□□□ -0.61
Sod1P08228 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.22□□□□□ -0.61
Sod1P08228 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.22□□□□□ -0.61
Sod1P08228 Gm26047-201ENSMUST00000157308 113 ntBASIC11.22□□□□□ -0.61
Sod1P08228 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.22□□□□□ -0.61
Sod1P08228 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gm26047-202ENSMUST00000198840 115 ntBASIC11.22□□□□□ -0.61
Sod1P08228 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sod1P08228 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.22□□□□□ -0.61
Sod1P08228 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.22□□□□□ -0.61
Sod1P08228 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.22□□□□□ -0.61
Sod1P08228 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sod1P08228 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Sod1P08228 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sod1P08228 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sod1P08228 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Sod1P08228 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms