Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxa4P06798 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxa4P06798 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Hoxa4P06798 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.83□□□□□ -0.51
Hoxa4P06798 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm23200-201ENSMUST00000104379 132 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm12217-201ENSMUST00000118858 696 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxa4P06798 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.83□□□□□ -0.52
Hoxa4P06798 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Hoxa4P06798 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa4P06798 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.82□□□□□ -0.52
Hoxa4P06798 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Gm25732-201ENSMUST00000175168 60 ntBASIC11.82□□□□□ -0.52
Hoxa4P06798 Gm4310-201ENSMUST00000177847 889 ntBASIC11.82□□□□□ -0.52
Hoxa4P06798 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.82□□□□□ -0.52
Hoxa4P06798 Gm6450-201ENSMUST00000200896 574 ntBASIC11.82□□□□□ -0.52
Hoxa4P06798 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Gm7848-201ENSMUST00000210739 718 ntBASIC11.82□□□□□ -0.52
Hoxa4P06798 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Hoxa4P06798 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa4P06798 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms