Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P06344 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P06344 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.72□□□□□ -0.69
P06344 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.72□□□□□ -0.69
P06344 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.72□□□□□ -0.69
P06344 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P06344 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Gm15711-201ENSMUST00000118889 535 ntBASIC10.72□□□□□ -0.69
P06344 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.72□□□□□ -0.69
P06344 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P06344 Gm25732-201ENSMUST00000175168 60 ntBASIC10.72□□□□□ -0.69
P06344 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Gm28071-201ENSMUST00000190355 478 ntBASIC10.72□□□□□ -0.69
P06344 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Gm17827-201ENSMUST00000211825 742 ntBASIC10.72□□□□□ -0.69
P06344 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.72□□□□□ -0.69
P06344 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P06344 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P06344 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
P06344 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.72□□□□□ -0.69
P06344 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P06344 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P06344 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P06344 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.72□□□□□ -0.69
P06344 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P06344 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.72□□□□□ -0.69
P06344 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.72□□□□□ -0.69
P06344 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P06344 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
P06344 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Gm23949-201ENSMUST00000104027 127 ntBASIC10.71□□□□□ -0.69
P06344 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
P06344 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
P06344 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.71□□□□□ -0.69
P06344 Gm14247-201ENSMUST00000120950 237 ntBASIC10.71□□□□□ -0.69
P06344 Gm12164-201ENSMUST00000121695 551 ntBASIC10.71□□□□□ -0.69
P06344 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.71□□□□□ -0.69
P06344 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.71□□□□□ -0.69
P06344 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.71□□□□□ -0.69
P06344 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
P06344 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.71□□□□□ -0.69
P06344 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
P06344 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.71□□□□□ -0.69
P06344 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.71□□□□□ -0.69
P06344 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.71□□□□□ -0.69
P06344 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.71□□□□□ -0.69
P06344 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
P06344 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
P06344 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P06344 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
P06344 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
P06344 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.71□□□□□ -0.69
P06344 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
P06344 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P06344 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P06344 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P06344 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
P06344 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P06344 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.71□□□□□ -0.7
P06344 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms