Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vti1aO89116 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Gm15515-201ENSMUST00000117827 822 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm12501-201ENSMUST00000119163 529 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm14665-201ENSMUST00000122294 557 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Gm25881-201ENSMUST00000157783 103 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm37246-201ENSMUST00000192665 835 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.98□□□□□ -0.33
Vti1aO89116 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm42599-201ENSMUST00000201308 469 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm43962-201ENSMUST00000203898 190 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Gm1821-202ENSMUST00000227415 750 ntBASIC12.98□□□□□ -0.33
Vti1aO89116 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vti1aO89116 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Vti1aO89116 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1aO89116 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.97□□□□□ -0.33
Vti1aO89116 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Gm10051-201ENSMUST00000145209 414 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Gm45770-201ENSMUST00000212105 616 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Gm21811-201ENSMUST00000096485 930 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Vti1aO89116 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.97□□□□□ -0.33
Vti1aO89116 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1aO89116 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.97□□□□□ -0.33
Vti1aO89116 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms