Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.54□□□□□ -0.56
Hcn1O88704 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hcn1O88704 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Hcn1O88704 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Hcn1O88704 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm12314-201ENSMUST00000118104 538 ntBASIC11.53□□□□□ -0.56
Hcn1O88704 Gm14999-201ENSMUST00000121039 624 ntBASIC11.53□□□□□ -0.56
Hcn1O88704 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.53□□□□□ -0.56
Hcn1O88704 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm27320-201ENSMUST00000184892 109 ntBASIC11.53□□□□□ -0.56
Hcn1O88704 Gm42599-201ENSMUST00000201308 469 ntBASIC11.53□□□□□ -0.56
Hcn1O88704 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.53□□□□□ -0.56
Hcn1O88704 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Hcn1O88704 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.53□□□□□ -0.56
Hcn1O88704 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hcn1O88704 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Hcn1O88704 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hcn1O88704 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hcn1O88704 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hcn1O88704 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Gm23270-201ENSMUST00000104055 131 ntBASIC11.52□□□□□ -0.57
Hcn1O88704 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hcn1O88704 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.52□□□□□ -0.57
Hcn1O88704 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.52□□□□□ -0.57
Hcn1O88704 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Gm10076-201ENSMUST00000073238 384 ntBASIC11.52□□□□□ -0.57
Hcn1O88704 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms