Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pdlim1O70400 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pdlim1O70400 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm11660-201ENSMUST00000120955 412 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm8343-201ENSMUST00000182705 994 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm37666-201ENSMUST00000194110 866 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm17827-201ENSMUST00000211825 742 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pdlim1O70400 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.91□□□□□ -0.5
Pdlim1O70400 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.91□□□□□ -0.5
Pdlim1O70400 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdlim1O70400 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm18038-201ENSMUST00000197900 485 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm4157-201ENSMUST00000211647 679 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdlim1O70400 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.9□□□□□ -0.5
Pdlim1O70400 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim1O70400 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pdlim1O70400 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms