Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm5356-201ENSMUST00000093326 615 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Gm12138-201ENSMUST00000122180 951 ntBASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.93□□□□□ -0.66
Shisa8J3QNX5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm12036-201ENSMUST00000120008 530 ntBASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Mir1894-201ENSMUST00000122802 81 ntBASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm24644-201ENSMUST00000157114 139 ntBASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm42937-201ENSMUST00000197360 752 ntBASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms