Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Gm14585-201ENSMUST00000120713 634 ntBASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Gm44329-201ENSMUST00000197469 112 ntBASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Gm44315-201ENSMUST00000203041 219 ntBASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Lect2-202ENSMUST00000225183 823 ntBASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn3aA2ASI5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Gm14071-201ENSMUST00000117817 509 ntBASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Gm5996-201ENSMUST00000211110 718 ntBASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn3aA2ASI5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Gm14942-201ENSMUST00000119642 336 ntBASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Gm8492-201ENSMUST00000182375 987 ntBASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Gm27910-201ENSMUST00000185004 107 ntBASIC13.27□□□□□ -0.29
Scn3aA2ASI5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn3aA2ASI5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.26□□□□□ -0.29
Scn3aA2ASI5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm11949-201ENSMUST00000117640 372 ntBASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Olfr584-201ENSMUST00000098210 964 ntBASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn3aA2ASI5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms