Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm42660-201ENSMUST00000197733 947 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 AC122314.1-201ENSMUST00000223056 2239 ntBASIC6.15□□□□□ -1.43
Ubr4A2AN08 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm16480-201ENSMUST00000120439 832 ntBASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm19918-201ENSMUST00000194858 400 ntBASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm8574-201ENSMUST00000203207 924 ntBASIC6.15□□□□□ -1.43
Ubr4A2AN08 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Gm37348-201ENSMUST00000193104 1789 ntBASIC6.15□□□□□ -1.43
Ubr4A2AN08 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC6.15□□□□□ -1.43
Ubr4A2AN08 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm12254-201ENSMUST00000134617 471 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm9353-201ENSMUST00000200472 604 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm30619-201ENSMUST00000213962 686 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Matn2-206ENSMUST00000228570 2798 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm38117-201ENSMUST00000194653 939 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 AC102569.1-201ENSMUST00000221563 685 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 AC164429.1-201ENSMUST00000224210 518 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm5159-201ENSMUST00000212733 1652 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm12247-201ENSMUST00000117585 670 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm7741-201ENSMUST00000181445 989 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm5468-202ENSMUST00000227851 682 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms