Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Trav8-1A0A075B641 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 AC159621.2-201ENSMUST00000223519 1326 ntBASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm42427-201ENSMUST00000200473 5292 ntBASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm12291-201ENSMUST00000121627 311 ntBASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm26464-201ENSMUST00000157094 305 ntBASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm5279-201ENSMUST00000199575 745 ntBASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm19078-201ENSMUST00000206311 727 ntBASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav8-1A0A075B641 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms