Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm44364-201ENSMUST00000198368 141 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb2S4R1M3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb2S4R1M3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm38341-201ENSMUST00000195357 515 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb2S4R1M3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms