Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Mir1247-201ENSMUST00000116706 82 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm13570-201ENSMUST00000140763 309 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm42693-201ENSMUST00000196779 631 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb3S4R1G7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm24934-201ENSMUST00000103764 111 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb3S4R1G7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
H2afb3S4R1G7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms