Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lgr5Q9Z1P4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gm14441-201ENSMUST00000121960 540 ntBASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gm6108-201ENSMUST00000208365 367 ntBASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.32□□□□□ -0.12
Lgr5Q9Z1P4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm23218-201ENSMUST00000158124 276 ntBASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Gm44315-201ENSMUST00000203041 219 ntBASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lgr5Q9Z1P4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.3□□□□□ -0.12
Lgr5Q9Z1P4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms