Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm10752-201ENSMUST00000218348 729 ntBASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm43178-201ENSMUST00000197257 1386 ntBASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm37396-201ENSMUST00000191827 1495 ntBASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx6Q9R1R0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm8337-201ENSMUST00000187358 1938 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm12403-201ENSMUST00000121384 959 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm15077-201ENSMUST00000122344 362 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm4335-201ENSMUST00000182581 1004 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm43664-201ENSMUST00000196038 734 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm21049-201ENSMUST00000197078 987 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm43005-201ENSMUST00000199015 648 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm44585-201ENSMUST00000207150 607 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 AC110816.1-201ENSMUST00000218559 980 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 AC117656.3-205ENSMUST00000224606 1205 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm4778-201ENSMUST00000098878 1098 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gm45684-201ENSMUST00000210244 1571 ntBASIC12□□□□□ -0.49
Lhx6Q9R1R0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx6Q9R1R0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms