Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm24934-201ENSMUST00000103764 111 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm14644-201ENSMUST00000116671 647 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm14028-201ENSMUST00000117434 479 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm9083-201ENSMUST00000120423 819 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm27341-201ENSMUST00000183570 106 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm44124-201ENSMUST00000204159 472 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm19994-201ENSMUST00000217086 586 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm14208-201ENSMUST00000119645 678 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm26461-201ENSMUST00000175064 290 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm16505-201ENSMUST00000179981 232 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm9230-201ENSMUST00000188228 532 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rps4l-202ENSMUST00000204242 789 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm8913-201ENSMUST00000209491 641 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Gm9996-201ENSMUST00000070359 913 ntBASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms