Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ube3bQ9ES34 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gm19353-201ENSMUST00000184561 445 ntBASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gm37246-201ENSMUST00000192665 835 ntBASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gm38117-201ENSMUST00000194653 939 ntBASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube3bQ9ES34 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm12165-201ENSMUST00000117047 342 ntBASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm15207-201ENSMUST00000119259 442 ntBASIC14.3□□□□□ -0.12
Ube3bQ9ES34 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm45575-201ENSMUST00000210283 548 ntBASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube3bQ9ES34 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Gm8815-201ENSMUST00000173809 620 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms