Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm11597-201ENSMUST00000121423 964 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm25043-201ENSMUST00000158604 212 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm27046-201ENSMUST00000182160 463 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm13097-201ENSMUST00000210722 397 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubb3Q9ERD7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubb3Q9ERD7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms