Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm11619-201ENSMUST00000117474 237 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm11578-201ENSMUST00000118530 459 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Trav11n-201ENSMUST00000200113 343 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm5340-201ENSMUST00000203733 880 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm6390-201ENSMUST00000215034 589 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm26035-201ENSMUST00000083065 308 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm23105-201ENSMUST00000083719 134 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-4Q9EQM3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm11560-201ENSMUST00000117567 948 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm12453-201ENSMUST00000121981 331 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm9089-201ENSMUST00000122027 526 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm22379-201ENSMUST00000157480 131 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm7719-201ENSMUST00000182374 975 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm37826-201ENSMUST00000195329 322 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm45113-201ENSMUST00000207518 165 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms