Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm27390-201ENSMUST00000184516 176 ntBASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm28882-201ENSMUST00000185504 314 ntBASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm8885-201ENSMUST00000189382 598 ntBASIC11.21□□□□□ -0.61
Cdc40Q9DC48 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdc40Q9DC48 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.21□□□□□ -0.62
Cdc40Q9DC48 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Gm5070-201ENSMUST00000177599 862 ntBASIC11.2□□□□□ -0.62
Cdc40Q9DC48 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdc40Q9DC48 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdc40Q9DC48 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms