Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm15321-201ENSMUST00000121290 288 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm15429-201ENSMUST00000151268 798 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm27838-201ENSMUST00000184829 128 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3a3Q9D554 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm16479-201ENSMUST00000121706 932 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm43514-201ENSMUST00000198852 424 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm6218-201ENSMUST00000219812 628 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.12□□□□□ -0.47
Sf3a3Q9D554 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm23935-201ENSMUST00000102303 57 ntBASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm24270-201ENSMUST00000102326 57 ntBASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm22189-201ENSMUST00000103822 86 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms