Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc7Q9D541 Gm23270-201ENSMUST00000104055 131 ntBASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gm15547-201ENSMUST00000122152 333 ntBASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gm26956-201ENSMUST00000182176 986 ntBASIC14.02□□□□□ -0.17
Ccdc7Q9D541 AY702102-202ENSMUST00000194651 1173 ntBASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc7Q9D541 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gm11700-201ENSMUST00000119409 403 ntBASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gm11960-201ENSMUST00000122068 925 ntBASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gm6963-201ENSMUST00000147879 379 ntBASIC14.01□□□□□ -0.17
Ccdc7Q9D541 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc7Q9D541 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc7Q9D541 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc7Q9D541 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc7Q9D541 Gm10152-201ENSMUST00000193475 1344 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms